OK,
First thing is to establish which voltage regulator you have.
I think that S1-2 have a Lucas RB106, which has 2 coils inside it and the cover is generally rounded on the corners, whereas S3-4 have a Lucas RB340 which has 3 coils inside it and square corners. They are basically interchangable, so don't rely on your Series number, as it may have been replaced previously.
The Team.net instructions are for the RB106 version.
RB106
With the terminals on the underside of the unit, from left to right they are :
A1 A F D E
RB340 has different terminals and letters, although the connections are actually similar.
Again, with the terminals on the underside, from left to right they are:
E D WL F B B
If you translate them into the equivalent terminals on the RB106 they would be:
E D D F A
ie WL and D are connected, and the two B terminals are the same as the A1 and A terminals (on the RB106 the two A terminals are actually connected via a small coil of wire - one is ignition, the other is "aux" ie when the key is turned backwards for accessories).
So, if you actually have an RB340, you would take a small wire and spark it between the F and B terminals to reverse polarity.
I've very suprised that the Team.net instructions don't say to spark the generator. Its also recommended if you fit a new/recon unit, just to make sure that the field coils are properly polarised.
I hope this helps and doesn't confuse!
cheers
Dave